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  • Frontal
  • Podium Abstract

    Gene Set-Level analyses enable Smaller Studies to compare groups in rare and infrequent Diseases or in ultra-fine stratification of common disorders

    • Dillon Aberasturi ;
    • Nima Pouladi ;
    • Samir Rachid Zaim ;
    • Colleen Kenost ;
    • Joanne Berghout ;
    • Walter W. Piegorsch ;
    • Yves A. Lussier

    Gene Set-Level analyses enable Smaller Studies to compare groups in rare and infrequent Diseases or in ultra-fine stratification of common disorders


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    GRACE: A Smoothing Algorithm for Removing Heterogeneous Noise and Implausible Fluctuations of Observed Disease Curves

    • Anushka Abeysekara ;
    • Christopher R. Wilson ;
    • Scott L. DuVall ;
    • Evan P. Carey

    GRACE: A Smoothing Algorithm for Removing Heterogeneous Noise and Implausible Fluctuations of Observed Disease Curves


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    Multimorbidity Patterns Across Race/Ethnicity Stratified by Age and Obesity: A Cross-sectional Study of a National U.S. Sample

    • Manal Alshakhs ;
    • Bianca Jackson ;
    • Davina Ikponmwosa ;
    • Rebecca Reynolds ;
    • Charisse Madlock Brown

    Multimorbidity Patterns Across Race/Ethnicity Stratified by Age and Obesity: A Cross-sectional Study of a National U.S. Sample


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    Lessons Learned from Large Scale Curation of EHR Data

    • Nadia Bahadur ;
    • Andrew Niederhausern ;
    • Neil J. Shah ;
    • Chelsea Nichols ;
    • Fenil Gandhi ;
    • Kimberly Chan ;
    • Laura E. Barton ;
    • Alysha Insinga ;
    • Grace Capreol ;
    • Lauren Esposito ;
    • Latasha Estrada ;
    • Joshua Goldberg ;
    • Ralph Nelson ;
    • Jasme Lee ;
    • Samantha Brown ;
    • Jessica A. Lavery ;
    • Molly Maloy ;
    • Katherine S. Panageas ;
    • Theodora A. Bakker ;
    • John Philip

    Lessons Learned from Large Scale Curation of EHR Data


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    Using machine learning to predict the negative patient experience using the HCAHPS survey

    • Vitej Bari ;
    • Jamie S. Hirsch ;
    • Joseph Narvaez ;
    • Robert Sardinia ;
    • Kevin Bock ;
    • Michael Oppenheim ;
    • Marsha Meytlis

    Using machine learning to predict the negative patient experience using the HCAHPS survey


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    Secondary Academic Appointments: A Hidden Dimension of Disparity?

    • Suresh Bhavnani ;
    • Weibin Zhang ;
    • Tho Ayala ;
    • Craig Cassidy ;
    • Sandra Hatch ;
    • Alfredo Torres ;
    • Charles Mouton ;
    • Randall Urban

    Secondary Academic Appointments: A Hidden Dimension of Disparity?


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    Healthcare assisting chatbot for personalized air quality notification and health recommendation using IoT: design and implementation

    • Chiraphat Boonnag ;
    • Piyapong Khumrin

    Healthcare assisting chatbot for personalized air quality notification and health recommendation using IoT: design and implementation


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    Comparing EHR data collected from FHIR API with an OMOP Database

    • Robert Carroll ;
    • Karthik Natarajan ;
    • Alex Cheng ;
    • Francesco Delacqua ;
    • Michelle Jones ;
    • Colleen Lawrence ;
    • Paul Harris

    Comparing EHR data collected from FHIR API with an OMOP Database


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    Pragmatic Design and Application of a Named Entity Recognition Pipeline to Assist Contact Tracers during the COVID-19 Pandemic

    • John Caskey ;
    • Iain McConnell ;
    • Madeline Oguss ;
    • Edwin Nyakoe-Nyasani ;
    • Dmitriy Dligach ;
    • Rachel Kulikoff ;
    • Brittany Grogan ;
    • Crystal Gibson ;
    • Elizabeth Wimmer ;
    • Traci E DeSalvo ;
    • Matthew Churpek ;
    • Majid Afshar

    Pragmatic Design and Application of a Named Entity Recognition Pipeline to Assist Contact Tracers during the COVID-19 Pandemic


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    Iterative improvement and validation of an algorithmic software application for remote medication management of hypertension

    • Kira Chaney ;
    • Hunter Nichols ;
    • Naomi DL Fisher ;
    • Alexander J Blood ;
    • David  Zelle ;
    • Thomas Venman ;
    • Jiyeon Shin ;
    • John Segal ;
    • John St. Laurent ;
    • Jacqueline Chasse ;
    • Jennifer Crossen ;
    • William J Gordon ;
    • Kavishwar B Wagholikar ;
    • Benjamin M Scirica

    Iterative improvement and validation of an algorithmic software application for remote medication management of hypertension


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    Magnified Convolutional Enrichment Representation Model

    • Guocai Chen ;
    • Herbert Chen ;
    • Yuntao Yang ;
    • Abhisek Mukherjee ;
    • Shervin Assassi ;
    • Claudio Soto ;
    • W. Jim Zheng

    Magnified Convolutional Enrichment Representation Model


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    Leveraging novel ePRO and existing EHR datamarts to assess clinical outcomes in ambulatory oncology

    • Jessica Cleveland ;
    • Sunyi Zhang ;
    • Sherry Lee ;
    • Christine Cronin ;
    • Jason Johnson ;
    • John Orechia ;
    • Deb Schrag ;
    • Michael Hassett ;
    • Nadine McCleary

    Leveraging novel ePRO and existing EHR datamarts to assess clinical outcomes in ambulatory oncology


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    Variability in EHR Data About Race and Ethnicity as Observed in the National COVID Cohort Collaborative Data Enclave

    • Lily Cook ;
    • Juan Espinoza ;
    • Nisha Mathews ;
    • Nicole Weiskopf ;
    • David Dorr ;
    • Kelly Gonzales ;
    • Charisse Madlock Brown ;
    • Adam Wilcox

    Variability in EHR Data About Race and Ethnicity as Observed in the National COVID Cohort Collaborative Data Enclave


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    Identifying Traumatic Brain Injury in Females from Electronic Health Records: Considerations for Defining a Cohort

    • Bernadette D’Alonzo ;
    • Rebecca Morse ;
    • Abigail Bretzin ;
    • Andrea Schneider ;
    • Silvia Canelón ;
    • Mary Boland

    Identifying Traumatic Brain Injury in Females from Electronic Health Records: Considerations for Defining a Cohort


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    Machine Learning for Developing a Prediction Model of Hospital Admission of Emergency Department Patients: Hype or Hope?

    • Anne de Hond ;
    • Wouter Raven ;
    • Laurens Schinkelshoek ;
    • Menno Gaakeer ;
    • Ewout ter Avest ;
    • Ozcan Sir ;
    • Heleen Lameijer ;
    • Roger A.P.A. Hessels ;
    • Resi Reijnen ;
    • Evert de Jonge ;
    • Ilse Kant ;
    • Ewout Steyerberg ;
    • Christian Nickel ;
    • Bas de Groot

    Machine Learning for Developing a Prediction Model of Hospital Admission of Emergency Department Patients: Hype or Hope?


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    Assessing Clinical Site Readiness for EHR-to-EDC Data Collection

    • Eric Eisenstein ;
    • Meredith Zozus ;
    • Maryam Garza ;
    • Holly Lanham ;
    • Bhargav Adagarla ;
    • Felicia Graham ;
    • Christie Milleson ;
    • Anita Walden ;
    • Kanecia Zimmerman ;
    • Karan Kumar

    Assessing Clinical Site Readiness for EHR-to-EDC Data Collection


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    Identifying Patients with Interstitial Lung Disease in Electronic Health Records: Development and Validation of Machine Learning Algorithms

    • Erica Farrand ;
    • Oksana Gologorskaya ;
    • Lakshmi Radhakrishnan ;
    • Hunter Mills ;
    • Atul Butte

    Identifying Patients with Interstitial Lung Disease in Electronic Health Records: Development and Validation of Machine Learning Algorithms


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    Measuring and Controlling Medical Record Abstraction Error Rates in an Observational Study

    • Maryam Garza ;
    • Zhuopei Hu ;
    • Jeannette Lee ;
    • Song Ounpraseuth ;
    • Jessica Snowden ;
    • Anita Walden ;
    • Alan Simon ;
    • Barbara McClaskey ;
    • Sandra Beauman ;
    • Sarah Sanders ;
    • Lori Devlin ;
    • Leslie Young ;
    • Meredith Zozus

    Measuring and Controlling Medical Record Abstraction Error Rates in an Observational Study


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    Developing A Precision Health, Patient Centered, Self-Management Framework

    • Stephanie Gilbertson-White ;
    • Heather Davis ;
    • Chris Ortman ;
    • Jamie Sorensen ;
    • Kimberli Garcia ;
    • Chi Yeung ;
    • Aaron Seaman

    Developing A Precision Health, Patient Centered, Self-Management Framework


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    The Challenge of Phenotyping Acute Adverse Events

    • Benjamin Goldstein ;
    • Jillian Hurst ;
    • Amanda Brucker ;
    • Haley Hostetler ;
    • John Strouse ;
    • Cindy Zhou ;
    • Azadeh Shoaibi ;
    • Hui Lee Wong

    The Challenge of Phenotyping Acute Adverse Events


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    Evaluation of Google Search Trends for COVID-19 Vaccination Administration Efforts within a Public Health Department

    • Sae Han ;
    • Nicholas Soulakis

    Evaluation of Google Search Trends for COVID-19 Vaccination Administration Efforts within a Public Health Department


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    Development of a Smartphone-Based Decision Support Tool for Predicting Patients at Risk of Chemotherapy-Induced Nausea and Vomiting using Decision Tree Induction

    • Humayera Islam ;
    • Md Kamruz Zaman Rana ;
    • A. Mosharraf Hossain ;
    • Illhoi Yoo ;
    • Abu Mosa

    Development of a Smartphone-Based Decision Support Tool for Predicting Patients at Risk of Chemotherapy-Induced Nausea and Vomiting using Decision Tree Induction


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    Large Scale Whole Genome Sequencing Analysis of Autism Spectrum Disorder

    • Jae-Yoon Jung ;
    • Brianna Chrisman ;
    • Kelley Paskov ;
    • Nate Stockham ;
    • Peter Washington ;
    • Sepideh Maleki ;
    • Kevin Tabatabaei ;
    • Dennis P.Wall

    Large Scale Whole Genome Sequencing Analysis of Autism Spectrum Disorder


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    mHealth-4-Mhealth (mobile health for migrant health) Surveillance Program

    • Ellen Kerns ;
    • Chad Abresch ;
    • Jana Broadhurst ;
    • Michelle Warren ;
    • Russell McCulloh

    mHealth-4-Mhealth (mobile health for migrant health) Surveillance Program


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    An Open-Source Toolkit for Enriching Patient Records with Social and Environmental Determinants of Health

    • Paul Kingsbury ;
    • Beau MacDonald ;
    • Praveen Angyan ;
    • Mark Abajian ;
    • Amy Chuang ;
    • Daniella Garofalo ;
    • Neil Bahroos ;
    • Daniella Meeker ;
    • John Wilson ;
    • Juan Espinoza

    An Open-Source Toolkit for Enriching Patient Records with Social and Environmental Determinants of Health


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    Improving Automatic Detection of COVID-19 Disease Severity in an International COVID-19 Research Network: Applying Chart Review and Hospital System Dynamics

    • Jeffrey Klann ;
    • Griffin Weber ;
    • John Holmes ;
    • Gil Omenn ;
    • Gabriel Brat ;
    • Shawn Murphy,

    Improving Automatic Detection of COVID-19 Disease Severity in an International COVID-19 Research Network: Applying Chart Review and Hospital System Dynamics


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    Evaluating Multifaceted Ontology Systems: A Preliminary Analysis of the GSSO in LGBTQIA+ and Medical Spaces

    • Clair Kronk ;
    • Cynthia Brandt ;
    • Judith Dexheimer

    Evaluating Multifaceted Ontology Systems: A Preliminary Analysis of the GSSO in LGBTQIA+ and Medical Spaces


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    Identifying Interpretable Clinical Subtypes within Heterogeneous Dementia Clinic Population

    • Sayantan Kumar ;
    • Zachary Abrams ;
    • Inez Oh ;
    • Aditi Gupta ;
    • Suzanne Schindler ;
    • Nupur Ghoshal ;
    • Albert Lai ;
    • Philip Payne

    Identifying Interpretable Clinical Subtypes within Heterogeneous Dementia Clinic Population


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    Extending Tree-Based Automated Machine Learning to Biomedical Image and Text Data Using Custom Feature Extractors

    • Rachit Kumar ;
    • Joseph Romano ;
    • Jason Moore

    Extending Tree-Based Automated Machine Learning to Biomedical Image and Text Data Using Custom Feature Extractors


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    Advancing Artificial Intelligence and Machine Learning Through Improved Public Competitions

    • Ezekiel Maier

    Advancing Artificial Intelligence and Machine Learning Through Improved Public Competitions


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    Landscape of Algorithmically Identified Patient Populations from the Electronic Health Record: A Systematic Review

    • Jennifer Malinowski ;
    • Rebecca Levinson ;
    • Luke Rasmussen ;
    • Suzette Bielinski ;
    • Laura Wiley

    Landscape of Algorithmically Identified Patient Populations from the Electronic Health Record: A Systematic Review


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    Understanding COVID-19 Information Needs from Conversational Logs

    • Mollie McKillop ;
    • Morgan Carroll ;
    • Brett South ;
    • Gretchen Purcell Jackson

    Understanding COVID-19 Information Needs from Conversational Logs


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    Addressing and Assessing COVID-19 Information Needs via a Weather App

    • Mollie McKillop ;
    • Courtney VanHouten ;
    • Carol Bales ;
    • Winnie Felix ;
    • Rezzan Hekmat ;
    • Gretchen Purcell Jackson

    Addressing and Assessing COVID-19 Information Needs via a Weather App


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    Neighborhood deprivation increases the risk of post-induction cesarean delivery

    • Jessica Meeker ;
    • Heather H. Burris ;
    • Ray Bai ;
    • Lisa D. Levine ;
    • Mary Regina Boland

    Neighborhood deprivation increases the risk of post-induction cesarean delivery


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    Discovering drug combinations impacting cancer incidence

    • Rachel Melamed

    Discovering drug combinations impacting cancer incidence


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    Fusion of Chest Radiographs and Electronic Medical Records using Deep Learning to Predict Intubation among Hospitalized Patients with COVID-19

    • Kim-Anh-Nhi Nguyen ;
    • Sahar Ghanavati ;
    • Prathamesh Parchure ;
    • Mukunth Rajendran ;
    • Arash Kia

    Fusion of Chest Radiographs and Electronic Medical Records using Deep Learning to Predict Intubation among Hospitalized Patients with COVID-19


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    Harmonization of Disease Pathways from Scientific Literature Using Graph Databases

    • Mihail Popescu ;
    • Mikhail Kovalenko ;
    • Dong Xu ;
    • Richard Hammer

    Harmonization of Disease Pathways from Scientific Literature Using Graph Databases


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    Consistency Check of the FHIR W5 Classification System in FHIR Modeling: Towards Improved Semantic Representation of FHIR RDF

    • Eric Prud’hommeaux ;
    • Deepak Sharma ;
    • David Booth ;
    • Daniel Stone ;
    • Nansu Zong ;
    • Yue Yu ;
    • Guohui Xiao ;
    • Harold Solbrig ;
    • Christopher Chute ;
    • Kathryn Ruddy ;
    • Emily Pfaff ;
    • Guoqian Jiang

    Consistency Check of the FHIR W5 Classification System in FHIR Modeling: Towards Improved Semantic Representation of FHIR RDF


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    Defining Venous Thromboembolism Using the Electronic Health Record: A Data Driven Approach

    • Avery Pullman ;
    • Patricia Dykes ;
    • Ania Syrowatka ;
    • Erin Coghlan ;
    • Wenyu Song ;
    • Michael Sainlaire

    Defining Venous Thromboembolism Using the Electronic Health Record: A Data Driven Approach


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    Using PEDSnet, a National Clinical Research Network, To Track the Evolution of COVIID-19 in Children Within the United States

    • Hanieh Razzaghi ;
    • H. Timothy Bunnell ;
    • Sarah Deakyne Davies ;
    • Richard Hoyt ;
    • Brianna Magnusen ;
    • Nathan Pajor ;
    • Daksha Ranade ;
    • L. Charles Bailey

    Using PEDSnet, a National Clinical Research Network, To Track the Evolution of COVIID-19 in Children Within the United States


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    Computerized clinical decision support for fall prevention: Defining end-user requirements for primary care staff and patients

    • Hannah Rice ;
    • Pamela Garabedian ;
    • Kristen Shear ;
    • Zoe Burns ;
    • Ragnhildur Bjarnadottir ;
    • Nancy Latham ;
    • Robert Lucero ;
    • Denise Schentrup ;
    • Patricia Dykes

    Computerized clinical decision support for fall prevention: Defining end-user requirements for primary care staff and patients


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    Enabling High-Validity Real-World Evidence in NASH

    • Dan Riskin ;
    • Shannon L. Rhodes ;
    • Eric Zollars ;
    • Arun J. Sanyal ;
    • Ricardo Dent

    Enabling High-Validity Real-World Evidence in NASH


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    A Pilot Study on Extrapolating Level of Confidence and Correctness Between Nurses And Physicians In Interpreting Ambiguity Around Phrases With Adverse Drug Event Mentions

    • Rubina Rizvi ;
    • Brett South ;
    • Bedda Rosario ;
    • Robert Medl ;
    • Karlis Draulis ;
    • Elisabeth Scheufele ;
    • Henry Feldman

    A Pilot Study on Extrapolating Level of Confidence and Correctness Between Nurses And Physicians In Interpreting Ambiguity Around Phrases With Adverse Drug Event Mentions


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    Canary in the Care Coordination Coalmine: Specialist Utilization as a Signal of Care Coordination Among Members Before and After Direct Primary Care Exposure

    • Bedda Rosario ;
    • Issa Sylla ;
    • Kristina Steinberg ;
    • George Kim ;
    • Yoonyoung Park ;
    • Sasha Ballen ;
    • Ching-Hua Chen ;
    • Judy George

    Canary in the Care Coordination Coalmine: Specialist Utilization as a Signal of Care Coordination Among Members Before and After Direct Primary Care Exposure


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    A Machine Learning Approach to Predict Decreased Opioid Prescribing Among a Cohort of 85K Providers

    • Jaime Smith

    A Machine Learning Approach to Predict Decreased Opioid Prescribing Among a Cohort of 85K Providers


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    Predicting Persistent Respiratory Sequelae in COVID-19 Patients

    • Zachary Strasser ;
    • Hossein Estiri ;
    • Sina Rashidian ;
    • Shawn Murphy,

    Predicting Persistent Respiratory Sequelae in COVID-19 Patients


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    An electronic health record-based approach to identify and characterize patients with immune checkpoint inhibitor-associated arthritis

    • Steven Tran ;
    • Luke Rasmussen ;
    • Jennifer Pacheco ;
    • Carlos Galvez ;
    • Kyle Tegtmeyer ;
    • Yuan Luo ;
    • Jeffrey Sosman ;
    • Abel Kho ;
    • Theresa Walunas

    An electronic health record-based approach to identify and characterize patients with immune checkpoint inhibitor-associated arthritis


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    Domain Adaptation of a Deep Learning Symptom Extractor for Different Patient Populations and Clinical Settings

    • Grace Turner ;
    • Kevin Lybarger ;
    • Alison Brennan ;
    • Elizabeth Chang ;
    • Nianiella Dorvall ;
    • Jagjeet Gill ;
    • Vy Huynh ;
    • Kylie Kerker ;
    • Jolie Shen ;
    • Erica Qiao ;
    • Matthew Thompson ;
    • Meliha Yetisgen

    Domain Adaptation of a Deep Learning Symptom Extractor for Different Patient Populations and Clinical Settings


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    Growth and Disparities in Mental Health, Telemedicine, and Telemedicine Mental Health Usage between 2013 and 2018 among Disabled Medicaid Clients in Urban, Suburban, and Rural Texas Counties

    • Benjamin Ukert ;
    • Hye-Chung Kum ;
    • Mark Lawley

    Growth and Disparities in Mental Health, Telemedicine, and Telemedicine Mental Health Usage between 2013 and 2018 among Disabled Medicaid Clients in Urban, Suburban, and Rural Texas Counties


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    Mondo Disease Ontology: Building a Community-Based Disease Resource

    • Nicole Vasilevsky ;
    • Sabrina Toro ;
    • Nico Matentzoglu ;
    • Dazhi Jiao ;
    • Nomi Harris ;
    • Melissa Haendel ;
    • Peter Robinson ;
    • Christopher Mungall

    Mondo Disease Ontology: Building a Community-Based Disease Resource


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    Deep Clinical Phenotyping of Race and Ethnicity-Stratified Alzheimer’s Disease Patients Leveraging Electronic Medical Records Data

    • Sarah Woldemariam ;
    • Alice Tang ;
    • Tomiko Oskotsky ;
    • Kristine Yaffe ;
    • Marina Sirota

    Deep Clinical Phenotyping of Race and Ethnicity-Stratified Alzheimer’s Disease Patients Leveraging Electronic Medical Records Data


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    Reversal of infected host gene expression identifies repurposed drug candidate for SARS-CoV-2 and its new variants

    • Jing Xing ;
    • Rama Shankar ;
    • Bin Chen ;
    • Meehyun Ko ;
    • Aleksandra Drelich ;
    • Shreya Paithankar ;
    • Eugene Chekalin ;
    • Thomas Dexheimer ;
    • Mei-Sze Chua ;
    • Surender Rajasekaran ;
    • Chien-Te Kent Tseng ;
    • Seungtaek Kim

    Reversal of infected host gene expression identifies repurposed drug candidate for SARS-CoV-2 and its new variants


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    Observability and Its Impact on Differential Bias for Clinical Prediction Models

    • Mengying Yan ;
    • Michael Pencina ;
    • Benjamin Goldstein

    Observability and Its Impact on Differential Bias for Clinical Prediction Models


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    Machine Learning Powered Identification of Cancer Diagnoses and Diagnosis Dates from EHR: an integrated pipeline that outperforms ICD-coded identification

    • Yunchen Yang ;
    • Timmy O’Connell ;
    • Arielle Redfern ;
    • David Corrigan ;
    • Youngjun Kim ;
    • Abbi Kern ;
    • Emily Reed ;
    • Kristen Miller ;
    • Lourdes Soler ;
    • Rene Dempsey ;
    • Jeremie Carlson ;
    • Eric Schadt ;
    • Rong Chen ;
    • Xiang Zhou

    Machine Learning Powered Identification of Cancer Diagnoses and Diagnosis Dates from EHR: an integrated pipeline that outperforms ICD-coded identification


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    Differential gene expression analysis stratified by APOE genotypes across brain regions in Alzheimer's disease

    • Grace Yang ;
    • Yaqiao Li ;
    • Stella Belonwu ;
    • Alice Tang ;
    • Tomiko Oskotsky ;
    • Marina Sirota

    Differential gene expression analysis stratified by APOE genotypes across brain regions in Alzheimer's disease


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    Generalizing an Antibiotic Recommendation Algorithm for Treatment of Urinary Tract Infections to a New York City Hospital System

    • Garrett Yoon ;
    • Vincent Major

    Generalizing an Antibiotic Recommendation Algorithm for Treatment of Urinary Tract Infections to a New York City Hospital System


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    Systematic comparison of phenomic profiles between All of Us Research Program and UK Biobank participants

    • Chenjie Zeng ;
    • Lisa A. Bastarache ;
    • David J. Schlueter ;
    • Jacob Keaton ;
    • Joshua C. Denny

    Systematic comparison of phenomic profiles between All of Us Research Program and UK Biobank participants


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    Creating classifiers to distinguish between speaker types in recorded nurse-patient verbal communication in home healthcare: a feasibility study

    • Maryam Zolnoori ;
    • Sasha Vergez ;
    • Ali Zolnour ;
    • Zoran Kostic ;
    • Maxim Topaz

    Creating classifiers to distinguish between speaker types in recorded nurse-patient verbal communication in home healthcare: a feasibility study


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    Developing a risk identification algorithms for identifying patients at risk of medication non-adherence in patients with depression

    • Ali Zolnour ;
    • Christina Eldredge ;
    • Yadollah Yaghoobzadeh ;
    • Maxim Topaz ;
    • Anthony Faiola ;
    • Paul Fontelo ;
    • Maryam Zolnoori

    Developing a risk identification algorithms for identifying patients at risk of medication non-adherence in patients with depression


    You must log in to view this content. All contents are accessible to AMIA members and meeting attendees. If you are interested in purchasing proceedings, please contact us at mail@amia.org