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  • Poster

    Identification and Analysis of Sex Specific Gene Expression Signatures in Alzheimer’s Disease

    • Aarzu Gupta ;
    • Manish Paranjpe ;
    • Marina Sirota ;
    • Alice Taubes ;
    • Kelly Zalocusky

    Identification and Analysis of Sex Specific Gene Expression Signatures in Alzheimer’s Disease


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    Assessing the Fidelity of the Care Team for Identifying Providers Who Should Receive Notifications from Early Warning Systems

    • Abdul A. Tariq ;
    • Jorge Luna ;
    • Rohit Chaudhry ;
    • Kui Tang ;
    • Natalie Yip ;
    • Robert Green ;
    • David Vawdrey

    Assessing the Fidelity of the Care Team for Identifying Providers Who Should Receive Notifications from Early Warning Systems


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    Hierarchical Mixed-Effect Logistic Regression to Predict Physician Adherence to Personalized Medicine Clinical Decision Support

    • Adam Matsil ;
    • Madeleine Shalowitz ;
    • Henry Dunnenberger ;
    • Joshua Eng ;
    • Peter J. Hulick

    Hierarchical Mixed-Effect Logistic Regression to Predict Physician Adherence to Personalized Medicine Clinical Decision Support


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    Comparison of Rockwood Index and Risk Analysis Index-Administrative as Predictors of Readmissions

    • Alex F. Bokov ;
    • Desiree Wilson ;
    • Sara E. Espinoza ;
    • Paula K. Shireman

    Comparison of Rockwood Index and Risk Analysis Index-Administrative as Predictors of Readmissions


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    A Multivariate Pathway Enrichment Analysis Model Based On Distance Correlations

    • Ali Shojaee Bakhtiari ;
    • Alexander V. Alekseyenko

    A Multivariate Pathway Enrichment Analysis Model Based On Distance Correlations


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    Provider Survey on Automated Clinical Decision Support System for Cardiovascular Risk Assessment

    • Alisha P. Chaudhry ;
    • Sujith Samudrala ;
    • Francisco Lopez-Jimenez ;
    • Jane Shellum ;
    • Rick A. Nishimura ;
    • Rajeev Chaudhry ;
    • Hongfang Liu ;
    • Adelaide M. Arruda-Olson

    Provider Survey on Automated Clinical Decision Support System for Cardiovascular Risk Assessment


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    Unsupervised Topic Modeling to Quantify Severe Infection Heterogeneity

    • Alison E. Fohner ;
    • John D. Greene ;
    • Brian L. Lawson ;
    • Jonathan H. Chen ;
    • Patricia Kipnis ;
    • Gabriel J. Escobar ;
    • Vincent Liu

    Unsupervised Topic Modeling to Quantify Severe Infection Heterogeneity


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    Gabriella Miller Kids First Data Resource Center: Advancing Genetic Research in Childhood Cancer and Structural Birth Defects

    • Allison P. Heath ;
    • Pichai Raman ;
    • Yuankun Zhu ;
    • Jena Lilly ;
    • Deanne Taylor ;
    • Phillip B. Storm ;
    • Angela J. Waanders ;
    • Vincent Ferretti ;
    • Lincoln Stein ;
    • Michele Mattioni ;
    • Brandi Davis-Dusenbery ;
    • Zachary Flamig ;
    • Robert Grossman ;
    • Samuel Volchenboum ;
    • Sabine Mueller ;
    • Javad Nazarian ;
    • Adam Resnick

    Gabriella Miller Kids First Data Resource Center: Advancing Genetic Research in Childhood Cancer and Structural Birth Defects


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    The UAB Foundational Ontology (UFO): A Health Ontology for Advancing Clinical and Translational Research

    • Amy Y. Wang ;
    • James J. Cimino

    The UAB Foundational Ontology (UFO): A Health Ontology for Advancing Clinical and Translational Research


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    Evaluation of a Clinical Classification Criteria-based EHR Phenotype for Lupus

    • Anika Ghosh ;
    • Theresa L. Walunas ;
    • Kathryn Jackson ;
    • Jennifer A. Pacheco ;
    • Luke V. Rasmussen ;
    • Yuan Luo ;
    • Ahn Chung ;
    • Daniel Erickson ;
    • Karen Mancera-Cuevas ;
    • Abel Kho ;
    • Rosalind Ramsey-Goldman

    Evaluation of a Clinical Classification Criteria-based EHR Phenotype for Lupus


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    A Virtual Tumor Board: Process Optimization of Clinical Decision Support in the VA Healthcare System

    • Annie Katam Ratna Paul ;
    • John Bono ;
    • Sylvester Sakilay ;
    • Jaroslaw Zola ;
    • Brett R. Johnson ;
    • Robert B. Hall ;
    • Nhan Do ;
    • Nathanael R. Fillmore ;
    • Frank Meng ;
    • Wilmon Mccray ;
    • Peter L. Elkin

    A Virtual Tumor Board: Process Optimization of Clinical Decision Support in the VA Healthcare System


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    Analyzing Temporal Progression of Neurofibromatosis Type-1 in Children

    • Arjav Shah ;
    • Aditi Gupta ;
    • Randi E. Foraker ;
    • Stephanie M. Morris ;
    • David H. Gutmann ;
    • Philip Payne

    Analyzing Temporal Progression of Neurofibromatosis Type-1 in Children


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    DNA Methylation Biomarkers of Food Allergy With Application in Diagnostics and Novel Gene Associations

    • Ayush Alag

    DNA Methylation Biomarkers of Food Allergy With Application in Diagnostics and Novel Gene Associations


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    MODIMA: A Method for Multivariate Omnibus Distance Mediation Analysis with Applications in Microbiome Data

    • Bashir Hamidi ;
    • Alexander V. Alekseyenko

    MODIMA: A Method for Multivariate Omnibus Distance Mediation Analysis with Applications in Microbiome Data


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    ODIMA: An Omnibus Method for Multivariate Distance Mediation Analysis for High-Dimensional Data

    • Bashir Hamidi ;
    • Alexander V. Alekseyenko

    ODIMA: An Omnibus Method for Multivariate Distance Mediation Analysis for High-Dimensional Data


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    Development and Validation of Extraction Tool for Healthcare Provider Information from the NPPES Registry

    • Benjamin Webb ;
    • RuiJun Chen ;
    • Karthik Natarajan

    Development and Validation of Extraction Tool for Healthcare Provider Information from the NPPES Registry


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    Towards reproducibility and quality in EHR-enabled data science – Methods and Strategy

    • Bhargav Adagarla ;
    • Brian J. McCourt ;
    • Matthew Harker ;
    • Bilikis J. Akindele

    Towards reproducibility and quality in EHR-enabled data science – Methods and Strategy


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    Analysis of Random Walk with Restart for Disease Gene Prioritization

    • Brandan M. Dunham ;
    • Madhavi K. Ganapathiraju

    Analysis of Random Walk with Restart for Disease Gene Prioritization


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    Quantifying Outcomes of Multidrug Resistant Infections Adjusting for Patient Level Case Complexity

    • Cade M. Nylund ;
    • Apryl Susi ;
    • Daniel Adams

    Quantifying Outcomes of Multidrug Resistant Infections Adjusting for Patient Level Case Complexity


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    A Conceptual Model for the Self-Monitoring of Blood Pressure: An Integrated Health Model Initiative Implementation Example

    • Corey Smith ;
    • Eric Mays ;
    • James Shalaby ;
    • Priyaranjan Tokachichu ;
    • Christopher J. Vitale ;
    • Leon Rozenblit

    A Conceptual Model for the Self-Monitoring of Blood Pressure: An Integrated Health Model Initiative Implementation Example


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    A Text Mining Approach for Obstetric History Identification in Electronic Health Records

    • Cosmin A. Bejan ;
    • Joshua C. Denny

    A Text Mining Approach for Obstetric History Identification in Electronic Health Records


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    Propensity score matching using electronic health record data: Assessing the impact of specialist care

    • Courtney Page ;
    • Tracy L. Setji ;
    • Neha J. Pagidipati ;
    • Benjamin Goldstein

    Propensity score matching using electronic health record data: Assessing the impact of specialist care


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    Reconstructing the Diagnostic Process in Colorectal Cancer

    • Daniel Fort ;
    • Aaron Klinger ;
    • Eboni Price-Haywood

    Reconstructing the Diagnostic Process in Colorectal Cancer


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    Definitions matter: Data issues in sepsis quality improvement efforts

    • Daniel G. Duncan ;
    • Rebecca Kitzmiller ;
    • Carol F. Durham

    Definitions matter: Data issues in sepsis quality improvement efforts


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    Standardized Nursing Toxicity Assessments Captured in the Electronic Health Record (EHR) Predict Early Discontinuation of Cancer Therapy: A Pilot Study of the Ohio State Sarcoma Outcomes Registry

    • David A. Liebner ;
    • Gabriel Tinoco ;
    • James L. Chen

    Standardized Nursing Toxicity Assessments Captured in the Electronic Health Record (EHR) Predict Early Discontinuation of Cancer Therapy: A Pilot Study of the Ohio State Sarcoma Outcomes Registry


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    Linking clinical molecular profiles of tumors to the electronic medical record

    • Debajyoti Datta ;
    • Theodore C. Goldstein

    Linking clinical molecular profiles of tumors to the electronic medical record


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    Automated counting of glomeruli in kidney needle biopsy using deep learning

    • Dmytro S. Lituiev ;
    • Dejan Dobi ;
    • Sung Jik Cha ;
    • Ruizhe Cheng ;
    • Jae Ho Sohn ;
    • Zoltan Laszik ;
    • Dexter Hadley

    Automated counting of glomeruli in kidney needle biopsy using deep learning


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    An Interdisciplinary Approach to Reducing Influenza Infections: a Prototype for Long-Term Care Facilities

    • Elly Hann

    An Interdisciplinary Approach to Reducing Influenza Infections: a Prototype for Long-Term Care Facilities


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    Cohort Identification for Septic Shock Leveraging Electronic Health Records

    • Francis Loh ;
    • Andrew Michelson ;
    • Sean C. Yu ;
    • Aditi Gupta ;
    • Marin H. Kollef ;
    • Albert M. Lai ;
    • Philip Payne

    Cohort Identification for Septic Shock Leveraging Electronic Health Records


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    Inconsistency in Racial and Ethnic Classification in CYP450 Pharmacogenetic Studies of Populations of African Ancestry

    • Frederick Zhang ;
    • Joseph Finkelstein

    Inconsistency in Racial and Ethnic Classification in CYP450 Pharmacogenetic Studies of Populations of African Ancestry


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    A de-identified word embedding model trained on the text of clinical case report manuscripts

    • Gary E. Weissman ;
    • Zachary Flamholz ;
    • Lyle H. Ungar

    A de-identified word embedding model trained on the text of clinical case report manuscripts


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    Characterizing Data from Emergency Medical Services Information Systems to Improve Motor Vehicle Crash Surveillance

    • Geetanjali Rajamani ;
    • Elizabeth A. Lindemann ;
    • Greg Silverman ;
    • Alexander Tremblay ;
    • Genevieve B. Melton ;
    • Christopher J. Tignanelli

    Characterizing Data from Emergency Medical Services Information Systems to Improve Motor Vehicle Crash Surveillance


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    A continuous-time Markov approach for modelling myelodysplastic syndromes progression from cross-sectional data

    • Giovanna Nicora ;
    • Federica Moretti ;
    • Elisabetta Sauta ;
    • Luca Malcovati ;
    • Matteo G. Della Porta ;
    • Silvana Quaglini ;
    • Mario Cazzola ;
    • Riccardo Bellazzi

    A continuous-time Markov approach for modelling myelodysplastic syndromes progression from cross-sectional data


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    Visualization of Clinically Relevant New Information from Clinical Reports in the EHR

    • Gretchen Hultman ;
    • Rui Zhang ;
    • Benjamin C. Knoll ;
    • Reed McEwan ;
    • Steven J. Skube ;
    • Genevieve B. Melton

    Visualization of Clinically Relevant New Information from Clinical Reports in the EHR


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    Development and Evaluation of a Website to Facilitate Cascade Screening for Familial Hypercholesterolemia

    • Hana Bangash ;
    • Thomas Suther ;
    • David Kochan ;
    • Iftikhar J. Kullo

    Development and Evaluation of a Website to Facilitate Cascade Screening for Familial Hypercholesterolemia


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    Data-driven Categorization of Opioid Abuse Trajectories

    • Hedyeh Mobahi ;
    • Negin Asadzadehzanjani ;
    • Janusz Wojtusiak

    Data-driven Categorization of Opioid Abuse Trajectories


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    Individualized Shared Decision Report to Support Knee and Hip Arthritis Care

    • Hua Zheng ;
    • Celeste Lemay ;
    • Danielle Lavallee ;
    • Wenjun Li ;
    • Patricia D. Franklin

    Individualized Shared Decision Report to Support Knee and Hip Arthritis Care


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    Lessons Learned from a Single IRB Review Process

    • Ivana T. Croghan ;
    • Paul Kingsbury ;
    • Hongfang Liu

    Lessons Learned from a Single IRB Review Process


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    Pan-cancer Analysis of Signaling Pathway Activity

    • Jason McDermott ;
    • Vincent G. Danna ;
    • Osama Arshad ;
    • Paul Piehowski ;
    • Anupriya Agarwal ;
    • Brian Druker ;
    • Karin Rodland

    Pan-cancer Analysis of Signaling Pathway Activity


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    Heterogeneous drug network modules to predict and characterize drug-drug interactions

    • Jaswanth K. Yella ;
    • Anil Jegga

    Heterogeneous drug network modules to predict and characterize drug-drug interactions


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    Medical Record Reading via Deep Learning Question and Answering

    • Jay Urbain

    Medical Record Reading via Deep Learning Question and Answering


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    Challenges in Measuring Guideline Adherence: Results of Bone Scan Utilization for Prostate Cancer Patients

    • Jean Coquet ;
    • Jung In Park ;
    • Selen Bozkurt ;
    • Kathleen M. Kan ;
    • Michelle Ferrari ;
    • James D. Brooks ;
    • Tina Hernandez-Boussard

    Challenges in Measuring Guideline Adherence: Results of Bone Scan Utilization for Prostate Cancer Patients


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    Using Clinical Notes to Assess the Exposure of Tobacco and Alcohol Use in the Electronic Health Record

    • Jessica Chen ;
    • Abel Ermias ;
    • Cosmin A. Bejan

    Using Clinical Notes to Assess the Exposure of Tobacco and Alcohol Use in the Electronic Health Record


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    Modifying the order of medication search results in an electronic health record to increase physician generic prescribing behavior

    • John Schrom ;
    • Paul M. Cohen ;
    • Sophie Krisch ;
    • Tamer Fakhouri

    Modifying the order of medication search results in an electronic health record to increase physician generic prescribing behavior


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    Mobile seizure reporting and data collection tool for real-time clinical decision support and patient management

    • Jonathan Bidwell ;
    • Michele C. Jackson ;
    • Alex Fialkow ;
    • Eugenia Chan ;
    • Eric Fleegler ;
    • Tobias Loddenkemper

    Mobile seizure reporting and data collection tool for real-time clinical decision support and patient management


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    Registration Boost Performance of Aggressive Prostate Cancer Diagnosis

    • Josh Sanyal ;
    • Imon Banerjee ;
    • Daniel Rubin

    Registration Boost Performance of Aggressive Prostate Cancer Diagnosis


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    Using Medical Claims to Find Disability Risk Factors in Newly Diagnosed Depression Disorders Patients

    • Joshua W. Morrison ;
    • Fraser Gaspar ;
    • Carolyn S. Dewa

    Using Medical Claims to Find Disability Risk Factors in Newly Diagnosed Depression Disorders Patients


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    Electronic health record mining for detection of suicidality following hospitalization for medical illness

    • Juliet B. Edgcomb ;
    • Trevor Shaddox ;
    • John O. Brooks

    Electronic health record mining for detection of suicidality following hospitalization for medical illness


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    REDCap Data Convert: a script to ETL spreadsheet data for REDCap

    • Kaitlyn Lavan ;
    • Peter D. Stetson ;
    • John Philip

    REDCap Data Convert: a script to ETL spreadsheet data for REDCap


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    An Objective Comparison of Two Clinical Trial Search Engines: ClinicalTrials.gov and XpertTrial

    • Kara Whelply ;
    • Navkaranbir Bajaj ;
    • Tapan Shirish Mehta

    An Objective Comparison of Two Clinical Trial Search Engines: ClinicalTrials.gov and XpertTrial


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    Comparison of Feature Selection Methods and Clinical Knowledge in Medicare Population to Predict High Cost Patients

    • Kartikey Grover ;
    • Zachary Grinspan ;
    • Fei Wang

    Comparison of Feature Selection Methods and Clinical Knowledge in Medicare Population to Predict High Cost Patients


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    Examining the Effect of Socioeconomic Status in Gene-Environment Interaction Studies Across Multiple Phenotypes

    • Kathryn Jackson ;
    • Yu Deng ;
    • Lindsay Zimmerman ;
    • Patrick Sleiman ;
    • Hakon Hakonarson ;
    • Peggy L. Peissig ;
    • Brody Holohan ;
    • Todd Lingren ;
    • Bahram Namjou-Khales ;
    • Laura J. Rasmussen-Torvik ;
    • Abel Kho

    Examining the Effect of Socioeconomic Status in Gene-Environment Interaction Studies Across Multiple Phenotypes


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    Hierarchical Clustering of Healthcare Provider Sublanguages by Specialty

    • Kevin Peterson ;
    • Paul Kingsbury

    Hierarchical Clustering of Healthcare Provider Sublanguages by Specialty


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    Systematic Protein Prioritization for Targeted Proteomics Studies via Literature Mining

    • Kun-Hsing Yu ;
    • Tsung-Lu Lee ;
    • Chi-Shiang Wang ;
    • Yu-Ju Chen ;
    • Christopher Re ;
    • S.C. Kou ;
    • Jung-Hsien Chiang ;
    • Michael Snyder ;
    • Isaac S. Kohane

    Systematic Protein Prioritization for Targeted Proteomics Studies via Literature Mining


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    Finding Understudied Disorders Potentially Associated with Maternal Morbidity and Mortality

    • Laritza M. Rodriguez ;
    • Dina Demner-Fushman

    Finding Understudied Disorders Potentially Associated with Maternal Morbidity and Mortality


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    I’ve Got a Golden Ticket! How the ADAPTABLE Study Uses Invitation Codes as a Gateway for Patients to Enroll Through the ADAPTABLE Patient Portal.

    • Lisa Eskenazi

    I’ve Got a Golden Ticket! How the ADAPTABLE Study Uses Invitation Codes as a Gateway for Patients to Enroll Through the ADAPTABLE Patient Portal.


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    Enhanced Execution of Standards-Based EHR Phenotype Algorithms

    • Luke V. Rasmussen ;
    • Richard C. Kiefer ;
    • Prakash Adekkanattu ;
    • Jennifer A. Pacheco ;
    • Jessica S. Ancker ;
    • Guoqian Jiang ;
    • Kathleen Lee ;
    • Yuan Luo ;
    • Fei Wang ;
    • Zhenxing Xu ;
    • Jyotishman Pathak

    Enhanced Execution of Standards-Based EHR Phenotype Algorithms


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    Developing an Online Platform for a Suicide Prevention Community of Practice at the Department of Veterans Affairs

    • Maria Souden ;
    • Jenifer Stelmack ;
    • Bonnie Paris ;
    • Hira Khan ;
    • Linda Kok ;
    • Shivankit Sethi ;
    • Jooho Lee ;
    • Akanksha Aggarwal ;
    • Catherine Blake ;
    • Michael Twidale

    Developing an Online Platform for a Suicide Prevention Community of Practice at the Department of Veterans Affairs


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    A machine learning approach to predicting shunt-dependent hydrocephalus after aneurysmal subarachnoid hemorrhage

    • Marvellous Oke ;
    • Richard M. Jin ;
    • Peter L. Elkin ;
    • Jason Davies

    A machine learning approach to predicting shunt-dependent hydrocephalus after aneurysmal subarachnoid hemorrhage


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    Representations of Ignorance: Known Unknowns in Prenatal Nutrition

    • Mayla R. Boguslav ;
    • Kevin B. Cohen ;
    • Larry Hunter ;
    • Sonia M. Leach

    Representations of Ignorance: Known Unknowns in Prenatal Nutrition


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    Splitting Sentences for Text Simplification: A Machine Learning Approach

    • Menglu Pei ;
    • Gondy Leroy ;
    • David Kauchak ;
    • Marton Szep ;
    • Andras Szep

    Splitting Sentences for Text Simplification: A Machine Learning Approach


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    Partners Healthcare Data Enclave: Enabling Secure, Robust, Collaborative Access for the Biobank Disease Challenge

    • Michael Mendis ;
    • Shawn N. Murphy ;
    • Victor M. Castro ;
    • Eloy Toscano ;
    • Edana Merchan

    Partners Healthcare Data Enclave: Enabling Secure, Robust, Collaborative Access for the Biobank Disease Challenge


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    Implementation and Maintenance of an Established Clinical Decision Support Tool Algorithm: Challenges and Recommendations

    • Michelle A. Padley ;
    • Tyler Madden ;
    • Jacob Hall ;
    • Matthew Pate ;
    • J. T. Brown

    Implementation and Maintenance of an Established Clinical Decision Support Tool Algorithm: Challenges and Recommendations


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    Automatic Standardization Algorithm for Categorical Laboratory Test Results

    • Mina Kim ;
    • Soo-Yong Shin ;
    • Byoungkee Yi

    Automatic Standardization Algorithm for Categorical Laboratory Test Results


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    Machine learning application in cancer treatment response evaluation to relieve inter-observer variability among radiologists

    • MinJae Woo ;
    • Steve Lowe ;
    • Michael Devane ;
    • Ron Gimbel

    Machine learning application in cancer treatment response evaluation to relieve inter-observer variability among radiologists


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    Data Visualization as a Clinical Decision Support Tool: Antibiotics

    • Nicholas Kurtzman ;
    • Eugene Y. Kim ;
    • Larry Nathanson ;
    • Anne Grossestreuer ;
    • Evan Leventhal ;
    • Steven Horng

    Data Visualization as a Clinical Decision Support Tool: Antibiotics


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    Designing Intuitive Dashboards for Real-time Decision Making in ICUs

    • Nikash Taskar ;
    • Aditi Gupta ;
    • Andrew Michelson ;
    • Francis Loh ;
    • Sean C. Yu ;
    • Marin H. Kollef ;
    • Albert M. Lai ;
    • Philip Payne

    Designing Intuitive Dashboards for Real-time Decision Making in ICUs


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    Evaluating In-hospital Death Disparities after Emergency Room Admission to Critical Care

    • Pamella C. Howell ;
    • Jason M. Davies ;
    • Peter L. Elkin

    Evaluating In-hospital Death Disparities after Emergency Room Admission to Critical Care


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    Nested Visualization for Compact, Reusable Representation of EHR Content

    • Paul Kingsbury ;
    • Vinod Kaggal ;
    • Jake Kugel ;
    • Sungrim Moon ;
    • Andrew Wen ;
    • Joshua Pankratz

    Nested Visualization for Compact, Reusable Representation of EHR Content


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    An Online Phenotype Risk Score Calculator Employing Electronic Health Records

    • Peter Speltz ;
    • Srushti Gangireddy ;
    • Morgan Higby-Flowers ;
    • Joshua C. Denny ;
    • Lisa Bastarache

    An Online Phenotype Risk Score Calculator Employing Electronic Health Records


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    DiseaseXpress: Leveraging large scale data from the Kids First Data Resource Center and Children's Brain Tumor Consortium to define new therapeutic opportunities for childhood cancers

    • Pichai Raman ;
    • Deanne Taylor ;
    • Komal S. Rathi ;
    • Karthik Kalletla ;
    • Yuankun Zhu ;
    • Bo Zhang ;
    • Anthony Cros ;
    • Javad Nazarian ;
    • Angela J. Waanders ;
    • Sabine Mueller ;
    • Phillip B. Storm ;
    • Adam Resnick

    DiseaseXpress: Leveraging large scale data from the Kids First Data Resource Center and Children's Brain Tumor Consortium to define new therapeutic opportunities for childhood cancers


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    NLM SNOMED-CT nursing lists, little overlap with physicians used terms.

    • Priya Patel ;
    • Karen Dunn Lopez ;
    • Andrew Boyd

    NLM SNOMED-CT nursing lists, little overlap with physicians used terms.


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    An Interactive Data Visualization Tool Developed from Deep Learning Implementation to Electronic Health Record Notes

    • Qi Liu ;
    • Allison M. Dunning ;
    • Azalea Kim ;
    • Julie Childers ;
    • Shelley A. Rusincovitch ;
    • Ursula A. Rogers ;
    • Ricardo Henao

    An Interactive Data Visualization Tool Developed from Deep Learning Implementation to Electronic Health Record Notes


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    Unraveling Renal Cell Carcinoma Differentiation and Prognoses by Integrative Histopathology-Transcriptomics Analysis

    • Rebecca Barber ;
    • Isaac S. Kohane ;
    • Kun-Hsing Yu

    Unraveling Renal Cell Carcinoma Differentiation and Prognoses by Integrative Histopathology-Transcriptomics Analysis


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    Adaptation of a Group-Based, HIV Risk Reduction Intervention to a Mobile App for Young Sexual Minority Men

    • Rebecca Schnall

    Adaptation of a Group-Based, HIV Risk Reduction Intervention to a Mobile App for Young Sexual Minority Men


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    Biosurveillance of virulence genes within human microbiome using public metagenomic repositories

    • Richard M. Jin ;
    • Sapan Mandloi ;
    • John C. Hu ;
    • Thomas A. Russo ;
    • Peter L. Elkin

    Biosurveillance of virulence genes within human microbiome using public metagenomic repositories


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    A Centralized Multi-Cohort Data Protection Model for i2b2

    • Robert D. Johnson ;
    • Matthew C. Wyatt ;
    • Geoffrey D. Gordon ;
    • James J. Cimino

    A Centralized Multi-Cohort Data Protection Model for i2b2


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    Phenotyping and Validation of Oncologic Diagnoses and Treatments using the OMOP Common Data Model

    • RuiJun Chen ;
    • Thomas Falconer ;
    • George Hripcsak

    Phenotyping and Validation of Oncologic Diagnoses and Treatments using the OMOP Common Data Model


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    A Network-Based Approach to Predict Hidden Biological Associations Between Drugs, Proteins and Diseases

    • Sapan Mandloi ;
    • Peter L. Elkin

    A Network-Based Approach to Predict Hidden Biological Associations Between Drugs, Proteins and Diseases


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    Assessing Clinician Implicit Biases in Opioid Abuse Encounters: A Use Case for Sentiment Analysis of Clinical Text

    • Sarah El-Azab ;
    • Timothy D. Imler

    Assessing Clinician Implicit Biases in Opioid Abuse Encounters: A Use Case for Sentiment Analysis of Clinical Text


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    Early Warning, Sepsis Prediction in General Ward

    • Sean C. Yu ;
    • Andrew Michelson ;
    • Aditi Gupta ;
    • Francis Loh ;
    • Marin H. Kollef ;
    • Albert M. Lai ;
    • Philip Payne

    Early Warning, Sepsis Prediction in General Ward


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    Automated Semantic Dictionary Creation to Capture Digital Rectal Examination Findings from the Clinical Narratives

    • Selen Bozkurt ;
    • Jean Coquet ;
    • Imon Banerjee ;
    • Kathleen M. Kan ;
    • Daniel Rubin ;
    • James D. Brooks ;
    • Tina Hernandez-Boussard

    Automated Semantic Dictionary Creation to Capture Digital Rectal Examination Findings from the Clinical Narratives


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    Computational Phenotype for Autism Spectrum Disorders

    • Shaina Reji ;
    • Hanieh RAZZAGHI ;
    • Charles Bailey

    Computational Phenotype for Autism Spectrum Disorders


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    Predictive Models to Identify Axial Spondyloarthritis

    • shaobo pei ;
    • Gopi Penmetsa ;
    • Grant Cannon ;
    • Daniel Clegg ;
    • Brian Sauer ;
    • Jessica Walsh

    Predictive Models to Identify Axial Spondyloarthritis


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    Computational Drug Repositioning for Precision Cancer Oncology based on Cancer Cells Screening and Analysis

    • Shaofeng Wu ;
    • Lijun Cheng

    Computational Drug Repositioning for Precision Cancer Oncology based on Cancer Cells Screening and Analysis


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    Electronic Health Record Connected Virtual Hypertension Management

    • Sheridan Rea ;
    • N. L. Downing

    Electronic Health Record Connected Virtual Hypertension Management


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    Developing a System to Detect Overlooked Radiology Reports

    • Shinichiroh Yokota ;
    • Shunsuke Doi ;
    • Takeshi Imai ;
    • Kazuhiko Ohe

    Developing a System to Detect Overlooked Radiology Reports


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    Investigation of indeterminacy of temporal information in clinical narratives based on linguistic features of event and time expressions

    • Soo Hyun Ryu ;
    • Arlen B. Brickman ;
    • Jinwei Hu ;
    • Richard M. Jin ;
    • Robert Lee ;
    • Frank D. LeHouillier ;
    • Peter L. Elkin

    Investigation of indeterminacy of temporal information in clinical narratives based on linguistic features of event and time expressions


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    eagle-i: An Open Source, Ontology-Driven and Domain-Agnostic Discovery Platform

    • Sophia K. Cheng ;
    • Juliane Schneider ;
    • Marc Ciriello ;
    • Diane Keogh ;
    • Douglas Macfadden

    eagle-i: An Open Source, Ontology-Driven and Domain-Agnostic Discovery Platform


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    Mapping HEDIS-specified NDCs to semantically equivalent NDCs

    • Srikanth Sivashankaran ;
    • Margaret Reading

    Mapping HEDIS-specified NDCs to semantically equivalent NDCs


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    The Impact of Biobanking Informatics on Translational Biomedical Science: A Case Study on the Biorepository Toolkit

    • Stephanie Huang ;
    • Suzanne Gerace ;
    • Alexander K. Gonzalez ;
    • Remo M. Williams ;
    • Edward Krause ;
    • Molina M. Maria ;
    • Viveknarayanan Padmanabhan1 ;
    • Jeffrey Pennington ;
    • Alex S. Felmeister

    The Impact of Biobanking Informatics on Translational Biomedical Science: A Case Study on the Biorepository Toolkit


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    Using Apple Machine Learning Algorithms to Detect and Subclassify Non-Small Cell Lung Cancer

    • Steven A. Borkowski ;
    • Stephen M. Mastorides ;
    • Catherine P. Wilson ;
    • Lauren A. DeLand ;
    • Andrew A. Borkowski

    Using Apple Machine Learning Algorithms to Detect and Subclassify Non-Small Cell Lung Cancer


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    Validation of a Natural Language Processing System to Identify Peripheral Artery Disease Cases from Clinical Narratives in 3 eMERGE sites

    • Sungrim Moon ;
    • Uriel Sanchez Rangel ;
    • Naveed Afzal ;
    • Cosmin A. Bejan ;
    • Ning Shang ;
    • Sunghwan Sohn ;
    • Joshua C. Denny ;
    • George Hripcsak ;
    • Iftikhar J. Kullo ;
    • Hongfang Liu ;
    • Adelaide M. Arruda-Olson

    Validation of a Natural Language Processing System to Identify Peripheral Artery Disease Cases from Clinical Narratives in 3 eMERGE sites


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    Discovering drug-disease interactions through phenotype-based drug modules

    • Suryanarayana Yaddanapudi ;
    • Anil Jegga

    Discovering drug-disease interactions through phenotype-based drug modules


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    Open Source Pipeline for Medical Image Data Storage and Extraction

    • Sylvester Sakilay ;
    • Scott T. Doyle ;
    • Danne C. Elbers ;
    • Luis E. Selva ;
    • Brett R. Johnson ;
    • Nhan Do ;
    • Peter L. Elkin

    Open Source Pipeline for Medical Image Data Storage and Extraction


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    LEAP!Rx: Integrating Exercise as a Prescription within the Clinical and Clinical Trial Workflows of the Electronic Health Record and REDCap

    • Tamara J. Winden ;
    • Russ Waitman ;
    • Eric Vidoni ;
    • Jonathan Clutton ;
    • Amber Watts ;
    • Angela Van Sciver ;
    • Patrick H. Davis ;
    • Angelica Allen ;
    • Garrett Weaver ;
    • Jeffrey Burns

    LEAP!Rx: Integrating Exercise as a Prescription within the Clinical and Clinical Trial Workflows of the Electronic Health Record and REDCap


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    Characterizing Metadata of e-Devices for Interventional Translational Research

    • Taylor J. Morgan ;
    • Ramkiran Gouripeddi ;
    • Katherine A. Sward

    Characterizing Metadata of e-Devices for Interventional Translational Research


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    Design and Implementation of a Chronic Opioid Registry Integrated with an Electronic Health Record

    • Timothy J. Hartman ;
    • Kim Nolen ;
    • Lance Nicholls ;
    • CT Lin ;
    • Katy E. Trinkley

    Design and Implementation of a Chronic Opioid Registry Integrated with an Electronic Health Record


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    Data Management Considerations using Electronic Health Record (EHR) Clinical Notes

    • Ursula A. Rogers ;
    • Shelley A. Rusincovitch ;
    • Allison M. Dunning ;
    • Ryan P. Craig

    Data Management Considerations using Electronic Health Record (EHR) Clinical Notes


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    Deep Learning Approach to automated detection of nuclei in microscopy images

    • Vishakha Sharma ;
    • Simina M. Boca ;
    • Joseph Bender ;
    • Matthew D. McCoy ;
    • Yuriy Gusev ;
    • Krithika Bhuvaneshwar ;
    • Brent T. Harris ;
    • Subha Madhavan

    Deep Learning Approach to automated detection of nuclei in microscopy images


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    Predicting AKI in patients treated with empiric antimicrobial therapy

    • Wilbur C. Rutter ;
    • Jeffery Talbert ;
    • David Burgess

    Predicting AKI in patients treated with empiric antimicrobial therapy


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    Identifying protein features important for drug repurposing

    • William T. Mangione ;
    • Ram Samudrala

    Identifying protein features important for drug repurposing


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    Identifying Hospitalizations on Mechanical Ventilation Through Radiology Data Using NLP

    • Xiao Qing Wang ;
    • Wyndy Wiitala ;
    • Hallie Prescott ;
    • Theodore Iwashyna

    Identifying Hospitalizations on Mechanical Ventilation Through Radiology Data Using NLP


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    Visualization of Clinical Pathways for Severe Sepsis Patients

    • Xing Song ;
    • Mei Liu ;
    • Russ Waitman ;
    • Anurag Patel ;
    • Steven Simpson

    Visualization of Clinical Pathways for Severe Sepsis Patients


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    Age as an Important Element in Analyzing Familial Pattern of Diseases

    • Yiqing Zhao ;
    • Andrew Wen ;
    • Yanshan Wang ;
    • Feichen Shen ;
    • Suzette J. Bielinski ;
    • Hongfang Liu

    Age as an Important Element in Analyzing Familial Pattern of Diseases


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    Voting Ensemble Pruning for De-identification of Electronic Health Records

    • Youngjun Kim ;
    • Stephane Meystre

    Voting Ensemble Pruning for De-identification of Electronic Health Records


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    Predictive Performance of Deep Learning Models using Longitudinal Electronic Health Records Data

    • Yue Liang ;
    • Zidi Xiu ;
    • Cara O'Brien ;
    • Armando Bedoya ;
    • Ricardo Henao ;
    • Benjamin Goldstein

    Predictive Performance of Deep Learning Models using Longitudinal Electronic Health Records Data


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    Bioinformatic Prediction of C>U RNA Editing Sites for APOBEC3A/G

    • Zackary M. Falls ;
    • Sapan Mandloi ;
    • John Bono ;
    • Shraddha Sharma ;
    • Ram Samudrala ;
    • Bora Baysal ;
    • Peter L. Elkin

    Bioinformatic Prediction of C>U RNA Editing Sites for APOBEC3A/G


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    An alternative way of characterizing injury to youth on farms

    • Zengyan Wang

    An alternative way of characterizing injury to youth on farms


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    Early Findings of a Survey on the Perception of Clinical Trial Generalizability Assessment and Eligibility Criteria Design

    • Zhe He ;
    • Jiang Bian

    Early Findings of a Survey on the Perception of Clinical Trial Generalizability Assessment and Eligibility Criteria Design


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    Analyzing the association of time-varying vital signs with in-hospital mortality & ICU transfer.

    • Zhecheng Sheng ;
    • Armando Bedoya ;
    • Cara O'Brien ;
    • Sheng Luo ;
    • Benjamin Goldstein

    Analyzing the association of time-varying vital signs with in-hospital mortality & ICU transfer.


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    Constructing Clinical Profiles of Rare Diseases Through Latent Dirichlet Allocation

    • Zhong Huang ;
    • Nishant Iyengar ;
    • James Moody ;
    • Rachel Richesson

    Constructing Clinical Profiles of Rare Diseases Through Latent Dirichlet Allocation


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    Adversarial Learning in Time-to-Event Prediction

    • Zidi Xiu ;
    • Yue Liang ;
    • Cara O'Brien ;
    • Armando Bedoya ;
    • Benjamin Goldstein ;
    • Ricardo Henao

    Adversarial Learning in Time-to-Event Prediction


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